Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ParpbpQ6IRT3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm27838-201ENSMUST00000184829 128 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm7063-201ENSMUST00000186840 981 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ParpbpQ6IRT3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ParpbpQ6IRT3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Gm14719-201ENSMUST00000121891 340 ntBASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Mir6977-201ENSMUST00000184960 64 ntBASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ParpbpQ6IRT3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ParpbpQ6IRT3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms