Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.04■□□□□ -0
Krt39Q6IFX4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.04■□□□□ -0
Krt39Q6IFX4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Krt39Q6IFX4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Gm15460-201ENSMUST00000118147 391 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Krt39Q6IFX4 Gm28630-201ENSMUST00000187806 498 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 Gm5779-201ENSMUST00000218467 910 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.04■□□□□ -0
Krt39Q6IFX4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.04■□□□□ -0
Krt39Q6IFX4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.04■□□□□ -0
Krt39Q6IFX4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt39Q6IFX4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Gm25948-201ENSMUST00000175334 112 ntBASIC15.03■□□□□ -0
Krt39Q6IFX4 Gm27430-201ENSMUST00000184585 107 ntBASIC15.03■□□□□ -0
Krt39Q6IFX4 Gm44333-201ENSMUST00000197168 107 ntBASIC15.03■□□□□ -0
Krt39Q6IFX4 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.03■□□□□ -0
Krt39Q6IFX4 Shd-206ENSMUST00000225145 998 ntBASIC15.03■□□□□ -0
Krt39Q6IFX4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.03■□□□□ -0
Krt39Q6IFX4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt39Q6IFX4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm13616-201ENSMUST00000120600 222 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm8927-201ENSMUST00000181978 981 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm21470-201ENSMUST00000187680 696 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm3222-201ENSMUST00000071282 990 ntBASIC15.02■□□□□ -0
Krt39Q6IFX4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt39Q6IFX4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.02■□□□□ -0
Krt39Q6IFX4 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt39Q6IFX4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms