Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.3□□□□□ -0.6
Hcfc1Q61191 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Gm8738-201ENSMUST00000172606 329 ntBASIC11.3□□□□□ -0.6
Hcfc1Q61191 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc1Q61191 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm43138-201ENSMUST00000199123 708 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.29□□□□□ -0.6
Hcfc1Q61191 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcfc1Q61191 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm23270-201ENSMUST00000104055 131 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm24990-201ENSMUST00000157406 323 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms