Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Gm12091-201ENSMUST00000146791 830 ntBASIC14.22□□□□□ -0.13
Traf3Q60803 Gm29608-201ENSMUST00000190444 463 ntBASIC14.22□□□□□ -0.13
Traf3Q60803 Gm8515-201ENSMUST00000194852 576 ntBASIC14.22□□□□□ -0.13
Traf3Q60803 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf3Q60803 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Traf3Q60803 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.21□□□□□ -0.13
Traf3Q60803 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.21□□□□□ -0.13
Traf3Q60803 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.21□□□□□ -0.13
Traf3Q60803 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.21□□□□□ -0.13
Traf3Q60803 Gm7063-201ENSMUST00000186840 981 ntBASIC14.21□□□□□ -0.13
Traf3Q60803 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.21□□□□□ -0.13
Traf3Q60803 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.21□□□□□ -0.13
Traf3Q60803 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.21□□□□□ -0.13
Traf3Q60803 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.21□□□□□ -0.13
Traf3Q60803 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Traf3Q60803 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Traf3Q60803 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf3Q60803 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Traf3Q60803 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Traf3Q60803 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Traf3Q60803 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
Traf3Q60803 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf3Q60803 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Traf3Q60803 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.21□□□□□ -0.14
Traf3Q60803 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Traf3Q60803 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Traf3Q60803 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 Gm6745-201ENSMUST00000199216 526 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Traf3Q60803 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.2□□□□□ -0.14
Traf3Q60803 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Traf3Q60803 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf3Q60803 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms