Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Gm5425-201ENSMUST00000214125 459 ntBASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav5d-4Q5R1F6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5d-4Q5R1F6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5d-4Q5R1F6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms