Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm24694-201ENSMUST00000180054 110 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm27663-201ENSMUST00000184839 110 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.18■□□□□ 0.18
Rnf20Q5DTM8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf20Q5DTM8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Gm9797-201ENSMUST00000052902 613 ntBASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms