Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1brtQ3UNC9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm11950-201ENSMUST00000121615 838 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm10653-202ENSMUST00000139570 835 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm27867-201ENSMUST00000184778 125 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm10812-201ENSMUST00000099864 546 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cks1brtQ3UNC9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cks1brtQ3UNC9 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Gm18489-201ENSMUST00000172565 551 ntBASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cks1brtQ3UNC9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms