Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.8□□□□□ -0.52
Q3U1D9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Q3U1D9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.79□□□□□ -0.52
Q3U1D9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Q3U1D9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Mir1982-201ENSMUST00000157368 74 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Mir7085-201ENSMUST00000184353 66 ntBASIC11.79□□□□□ -0.52
Q3U1D9 AY702102-202ENSMUST00000194651 1173 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Itm2b-204ENSMUST00000228637 783 ntBASIC11.79□□□□□ -0.52
Q3U1D9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Q3U1D9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Q3U1D9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Q3U1D9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Q3U1D9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.78□□□□□ -0.52
Q3U1D9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Q3U1D9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.78□□□□□ -0.52
Q3U1D9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Q3U1D9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.78□□□□□ -0.52
Q3U1D9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.78□□□□□ -0.52
Q3U1D9 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.78□□□□□ -0.52
Q3U1D9 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.78□□□□□ -0.52
Q3U1D9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Q3U1D9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.78□□□□□ -0.52
Q3U1D9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.78□□□□□ -0.52
Q3U1D9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms