Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fndc4Q3TR08 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fndc4Q3TR08 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm12882-201ENSMUST00000121696 517 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm24158-201ENSMUST00000175263 71 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm29310-201ENSMUST00000185468 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21825-201ENSMUST00000185728 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm29109-201ENSMUST00000185895 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21896-201ENSMUST00000186520 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21873-201ENSMUST00000186728 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21794-201ENSMUST00000187056 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21880-201ENSMUST00000187275 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21826-201ENSMUST00000187451 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21198-201ENSMUST00000188393 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21749-201ENSMUST00000189343 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21901-201ENSMUST00000189568 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm29424-201ENSMUST00000189716 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm28599-201ENSMUST00000189838 694 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21867-201ENSMUST00000189917 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm29269-201ENSMUST00000190087 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21722-201ENSMUST00000190153 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm28423-201ENSMUST00000190701 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21899-201ENSMUST00000190745 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21910-201ENSMUST00000191163 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21849-201ENSMUST00000191571 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm28678-201ENSMUST00000191593 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm20910-201ENSMUST00000193268 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Gm21871-201ENSMUST00000194621 696 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fndc4Q3TR08 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fndc4Q3TR08 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms