Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ccbe1Q3MI99 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Gm37935-201ENSMUST00000192012 982 ntBASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccbe1Q3MI99 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccbe1Q3MI99 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44357-201ENSMUST00000195897 142 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm19658-201ENSMUST00000196231 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44367-201ENSMUST00000196836 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44350-201ENSMUST00000197197 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44390-201ENSMUST00000197533 144 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44313-201ENSMUST00000198018 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44486-201ENSMUST00000198508 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44314-201ENSMUST00000199263 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44394-201ENSMUST00000199558 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44484-201ENSMUST00000199873 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44466-201ENSMUST00000200264 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm44359-201ENSMUST00000200671 138 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Gm9182-201ENSMUST00000217829 639 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccbe1Q3MI99 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms