Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx2Q03358 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msx2Q03358 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.17□□□□□ -0.3
Msx2Q03358 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.17□□□□□ -0.3
Msx2Q03358 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.17□□□□□ -0.3
Msx2Q03358 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.17□□□□□ -0.3
Msx2Q03358 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msx2Q03358 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.17□□□□□ -0.3
Msx2Q03358 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx2Q03358 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx2Q03358 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.16□□□□□ -0.3
Msx2Q03358 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.16□□□□□ -0.3
Msx2Q03358 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.16□□□□□ -0.3
Msx2Q03358 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.16□□□□□ -0.3
Msx2Q03358 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.16□□□□□ -0.3
Msx2Q03358 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Msx2Q03358 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx2Q03358 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.15□□□□□ -0.3
Msx2Q03358 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Msx2Q03358 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Msx2Q03358 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Msx2Q03358 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 AA543401-201ENSMUST00000164248 1269 ntBASIC13.15□□□□□ -0.3
Msx2Q03358 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Msx2Q03358 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.15□□□□□ -0.3
Msx2Q03358 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.15□□□□□ -0.3
Msx2Q03358 Psmb5-202ENSMUST00000227257 622 ntBASIC13.15□□□□□ -0.3
Msx2Q03358 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Msx2Q03358 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msx2Q03358 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms