Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Gm5177-201ENSMUST00000183092 997 ntBASIC13.41□□□□□ -0.26
Shox2P70390 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.41□□□□□ -0.26
Shox2P70390 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.41□□□□□ -0.26
Shox2P70390 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.41□□□□□ -0.26
Shox2P70390 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.41□□□□□ -0.26
Shox2P70390 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.41□□□□□ -0.26
Shox2P70390 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.41□□□□□ -0.26
Shox2P70390 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Shox2P70390 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Shox2P70390 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Mir698-201ENSMUST00000102164 109 ntBASIC13.4□□□□□ -0.26
Shox2P70390 Gm9385-201ENSMUST00000117563 472 ntBASIC13.4□□□□□ -0.26
Shox2P70390 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.4□□□□□ -0.26
Shox2P70390 Mir7221-201ENSMUST00000184009 72 ntBASIC13.4□□□□□ -0.26
Shox2P70390 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Shox2P70390 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Shox2P70390 Mir497b-201ENSMUST00000093601 125 ntBASIC13.4□□□□□ -0.26
Shox2P70390 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.4□□□□□ -0.26
Shox2P70390 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.4□□□□□ -0.26
Shox2P70390 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shox2P70390 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.4□□□□□ -0.27
Shox2P70390 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.27
Shox2P70390 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Shox2P70390 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Shox2P70390 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.39□□□□□ -0.27
Shox2P70390 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.39□□□□□ -0.27
Shox2P70390 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm37714-201ENSMUST00000194742 342 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.39□□□□□ -0.27
Shox2P70390 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 AV026068-213ENSMUST00000223675 1171 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm10819-201ENSMUST00000099988 561 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms