Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.03□□□□□ -0.16
Smad1P70340 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.03□□□□□ -0.16
Smad1P70340 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.03□□□□□ -0.16
Smad1P70340 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.03□□□□□ -0.16
Smad1P70340 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.03□□□□□ -0.16
Smad1P70340 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Smad1P70340 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smad1P70340 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smad1P70340 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smad1P70340 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smad1P70340 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.02□□□□□ -0.16
Smad1P70340 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.02□□□□□ -0.16
Smad1P70340 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.02□□□□□ -0.16
Smad1P70340 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smad1P70340 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Smad1P70340 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smad1P70340 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smad1P70340 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.02□□□□□ -0.17
Smad1P70340 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Gm23984-201ENSMUST00000157139 203 ntBASIC14.02□□□□□ -0.17
Smad1P70340 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.02□□□□□ -0.17
Smad1P70340 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.02□□□□□ -0.17
Smad1P70340 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.02□□□□□ -0.17
Smad1P70340 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Dupd1-202ENSMUST00000224735 548 ntBASIC14.02□□□□□ -0.17
Smad1P70340 Shd-206ENSMUST00000225145 998 ntBASIC14.02□□□□□ -0.17
Smad1P70340 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smad1P70340 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.02□□□□□ -0.17
Smad1P70340 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.02□□□□□ -0.17
Smad1P70340 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.01□□□□□ -0.17
Smad1P70340 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smad1P70340 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.01□□□□□ -0.17
Smad1P70340 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.01□□□□□ -0.17
Smad1P70340 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.01□□□□□ -0.17
Smad1P70340 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smad1P70340 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smad1P70340 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smad1P70340 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms