Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Pdlim4P70271 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Gm13385-201ENSMUST00000121089 220 ntBASIC11.33□□□□□ -0.6
Pdlim4P70271 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Gm27437-201ENSMUST00000183429 107 ntBASIC11.33□□□□□ -0.6
Pdlim4P70271 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pdlim4P70271 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Mir497b-201ENSMUST00000093601 125 ntBASIC11.33□□□□□ -0.6
Pdlim4P70271 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.33□□□□□ -0.6
Pdlim4P70271 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pdlim4P70271 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Syt7-205ENSMUST00000224135 1557 ntBASIC11.33□□□□□ -0.6
Pdlim4P70271 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdlim4P70271 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Mir698-201ENSMUST00000102164 109 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm15321-201ENSMUST00000121290 288 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm44855-201ENSMUST00000205725 362 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm9797-201ENSMUST00000052902 613 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pdlim4P70271 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.32□□□□□ -0.6
Pdlim4P70271 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdlim4P70271 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms