Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Six5P70178 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.72□□□□□ -0.37
Six5P70178 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.72□□□□□ -0.37
Six5P70178 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Six5P70178 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.72□□□□□ -0.37
Six5P70178 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.72□□□□□ -0.37
Six5P70178 Gm17330-201ENSMUST00000221047 165 ntBASIC12.72□□□□□ -0.37
Six5P70178 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.72□□□□□ -0.37
Six5P70178 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Gm24447-201ENSMUST00000083977 338 ntBASIC12.72□□□□□ -0.37
Six5P70178 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Six5P70178 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Six5P70178 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Six5P70178 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Six5P70178 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.71□□□□□ -0.37
Six5P70178 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.71□□□□□ -0.37
Six5P70178 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Gm11524-201ENSMUST00000119349 807 ntBASIC12.71□□□□□ -0.37
Six5P70178 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.71□□□□□ -0.37
Six5P70178 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Six5P70178 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Six5P70178 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.71□□□□□ -0.37
Six5P70178 Gm42612-201ENSMUST00000197986 623 ntBASIC12.71□□□□□ -0.37
Six5P70178 Gm43170-201ENSMUST00000199827 612 ntBASIC12.71□□□□□ -0.37
Six5P70178 Gm19078-201ENSMUST00000206311 727 ntBASIC12.71□□□□□ -0.37
Six5P70178 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.71□□□□□ -0.37
Six5P70178 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.71□□□□□ -0.37
Six5P70178 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Six5P70178 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Six5P70178 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
Six5P70178 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Six5P70178 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.71□□□□□ -0.38
Six5P70178 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Six5P70178 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.7□□□□□ -0.38
Six5P70178 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Six5P70178 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Six5P70178 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six5P70178 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.7□□□□□ -0.38
Six5P70178 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Six5P70178 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Six5P70178 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Six5P70178 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms