Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Gm2810-201ENSMUST00000118681 990 ntBASIC15.15■□□□□ 0.02
Tpm1P58771 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.15■□□□□ 0.02
Tpm1P58771 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.15■□□□□ 0.02
Tpm1P58771 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tpm1P58771 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.15■□□□□ 0.02
Tpm1P58771 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Gm13823-201ENSMUST00000119930 345 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 Gm6222-201ENSMUST00000120787 396 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.14■□□□□ 0.01
Tpm1P58771 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Gm18027-201ENSMUST00000218947 619 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tpm1P58771 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.14■□□□□ 0.01
Tpm1P58771 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tpm1P58771 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm1P58771 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.13■□□□□ 0.01
Tpm1P58771 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.13■□□□□ 0.01
Tpm1P58771 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.13■□□□□ 0.01
Tpm1P58771 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Tpm1P58771 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.13■□□□□ 0.01
Tpm1P58771 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.13■□□□□ 0.01
Tpm1P58771 Gm9727-201ENSMUST00000161387 555 ntBASIC15.13■□□□□ 0.01
Tpm1P58771 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.13■□□□□ 0.01
Tpm1P58771 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tpm1P58771 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tpm1P58771 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tpm1P58771 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tpm1P58771 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.13■□□□□ 0.01
Tpm1P58771 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tpm1P58771 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 BC001981-202ENSMUST00000191393 1545 ntBASIC15.12■□□□□ 0.01
Tpm1P58771 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms