Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Gm6222-201ENSMUST00000120787 396 ntBASIC12.41□□□□□ -0.42
Cdh11P55288 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdh11P55288 Gm27437-201ENSMUST00000183429 107 ntBASIC12.41□□□□□ -0.42
Cdh11P55288 Gm27306-201ENSMUST00000183970 107 ntBASIC12.41□□□□□ -0.42
Cdh11P55288 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdh11P55288 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdh11P55288 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdh11P55288 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.41□□□□□ -0.42
Cdh11P55288 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdh11P55288 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdh11P55288 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cdh11P55288 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdh11P55288 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh11P55288 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.4□□□□□ -0.42
Cdh11P55288 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh11P55288 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cdh11P55288 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Gm27533-201ENSMUST00000183800 152 ntBASIC12.4□□□□□ -0.42
Cdh11P55288 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh11P55288 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh11P55288 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh11P55288 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh11P55288 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.4□□□□□ -0.42
Cdh11P55288 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh11P55288 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdh11P55288 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh11P55288 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh11P55288 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh11P55288 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh11P55288 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cdh11P55288 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh11P55288 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdh11P55288 Gm5566-201ENSMUST00000116118 459 ntBASIC12.39□□□□□ -0.43
Cdh11P55288 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdh11P55288 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdh11P55288 Gm5866-201ENSMUST00000177881 973 ntBASIC12.39□□□□□ -0.43
Cdh11P55288 Gm27680-201ENSMUST00000184192 160 ntBASIC12.39□□□□□ -0.43
Cdh11P55288 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh11P55288 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms