Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Atxn1P54254 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Atxn1P54254 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.48□□□□□ -0.25
Atxn1P54254 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm10275-202ENSMUST00000168697 495 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm42627-201ENSMUST00000197347 224 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm43138-201ENSMUST00000199123 708 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm18935-201ENSMUST00000212692 664 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Gm10275-201ENSMUST00000092620 635 ntBASIC13.48□□□□□ -0.25
Atxn1P54254 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Atxn1P54254 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.48□□□□□ -0.25
Atxn1P54254 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atxn1P54254 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.47□□□□□ -0.25
Atxn1P54254 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.47□□□□□ -0.25
Atxn1P54254 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Atxn1P54254 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Atxn1P54254 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.47□□□□□ -0.25
Atxn1P54254 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.47□□□□□ -0.25
Atxn1P54254 Gm6334-201ENSMUST00000207083 228 ntBASIC13.47□□□□□ -0.25
Atxn1P54254 Gm9368-201ENSMUST00000219348 831 ntBASIC13.47□□□□□ -0.25
Atxn1P54254 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.47□□□□□ -0.25
Atxn1P54254 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.47□□□□□ -0.25
Atxn1P54254 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atxn1P54254 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Atxn1P54254 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Atxn1P54254 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atxn1P54254 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Atxn1P54254 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms