Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox2P48432 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox2P48432 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.73□□□□□ -0.37
Sox2P48432 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sox2P48432 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox2P48432 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox2P48432 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.73□□□□□ -0.37
Sox2P48432 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox2P48432 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox2P48432 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.72□□□□□ -0.37
Sox2P48432 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox2P48432 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox2P48432 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Gm11745-201ENSMUST00000121669 448 ntBASIC12.72□□□□□ -0.37
Sox2P48432 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox2P48432 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox2P48432 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.72□□□□□ -0.37
Sox2P48432 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Gm6443-201ENSMUST00000203599 874 ntBASIC12.72□□□□□ -0.37
Sox2P48432 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox2P48432 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox2P48432 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sox2P48432 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox2P48432 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.71□□□□□ -0.37
Sox2P48432 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Sox2P48432 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox2P48432 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.71□□□□□ -0.37
Sox2P48432 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox2P48432 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox2P48432 Gm1401-201ENSMUST00000122048 772 ntBASIC12.71□□□□□ -0.37
Sox2P48432 Gm45612-201ENSMUST00000211320 160 ntBASIC12.71□□□□□ -0.37
Sox2P48432 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox2P48432 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Sox2P48432 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.71□□□□□ -0.38
Sox2P48432 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Sox2P48432 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sox2P48432 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox2P48432 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox2P48432 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox2P48432 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms