Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfx2P48379 Gm17794-201ENSMUST00000220252 955 ntBASIC14.25□□□□□ -0.13
Rfx2P48379 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.25□□□□□ -0.13
Rfx2P48379 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.25□□□□□ -0.13
Rfx2P48379 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Rfx2P48379 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rfx2P48379 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.25□□□□□ -0.13
Rfx2P48379 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rfx2P48379 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx2P48379 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx2P48379 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 Gm13829-201ENSMUST00000119600 138 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.24□□□□□ -0.13
Rfx2P48379 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
Rfx2P48379 Gm18062-201ENSMUST00000208020 547 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 Gm18055-201ENSMUST00000208254 547 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Gm5356-201ENSMUST00000093326 615 ntBASIC14.24□□□□□ -0.13
Rfx2P48379 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rfx2P48379 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx2P48379 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx2P48379 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rfx2P48379 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Rfx2P48379 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfx2P48379 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm11524-201ENSMUST00000119349 807 ntBASIC14.23□□□□□ -0.13
Rfx2P48379 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm17150-201ENSMUST00000165577 381 ntBASIC14.23□□□□□ -0.13
Rfx2P48379 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm27892-201ENSMUST00000185017 106 ntBASIC14.23□□□□□ -0.13
Rfx2P48379 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfx2P48379 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.23□□□□□ -0.13
Rfx2P48379 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx2P48379 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx2P48379 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx2P48379 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfx2P48379 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms