Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.07□□□□□ -0.32
Sox18P43680 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Gm26226-201ENSMUST00000082509 116 ntBASIC13.07□□□□□ -0.32
Sox18P43680 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.07□□□□□ -0.32
Sox18P43680 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox18P43680 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Gm24255-201ENSMUST00000104481 128 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.06□□□□□ -0.32
Sox18P43680 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox18P43680 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox18P43680 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Gm8927-201ENSMUST00000181978 981 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Sox18P43680 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.06□□□□□ -0.32
Sox18P43680 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Gm3222-201ENSMUST00000071282 990 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.06□□□□□ -0.32
Sox18P43680 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox18P43680 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox18P43680 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox18P43680 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox18P43680 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Gm15782-201ENSMUST00000121073 445 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Gm12134-201ENSMUST00000122109 520 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.05□□□□□ -0.32
Sox18P43680 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox18P43680 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox18P43680 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sox18P43680 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox18P43680 Gm29747-201ENSMUST00000194764 585 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox18P43680 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox18P43680 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms