Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cdx2P43241 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdx2P43241 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm2991-201ENSMUST00000173338 480 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Gm37259-201ENSMUST00000193903 849 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm8227-201ENSMUST00000223306 571 ntBASIC12.86□□□□□ -0.35
Cdx2P43241 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdx2P43241 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdx2P43241 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cdx2P43241 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdx2P43241 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdx2P43241 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Cdx2P43241 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Gm6023-201ENSMUST00000118217 606 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gm2231-201ENSMUST00000125661 612 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdx2P43241 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdx2P43241 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gm38158-201ENSMUST00000194617 339 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.85□□□□□ -0.35
Cdx2P43241 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdx2P43241 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdx2P43241 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdx2P43241 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdx2P43241 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdx2P43241 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdx2P43241 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Cdx2P43241 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdx2P43241 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdx2P43241 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdx2P43241 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms