Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd1P40201 Gm22138-201ENSMUST00000158748 128 ntBASIC19.93■□□□□ 0.78
Chd1P40201 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Chd1P40201 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC19.93■□□□□ 0.78
Chd1P40201 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd1P40201 AC129219.2-201ENSMUST00000224324 701 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Gm1821-202ENSMUST00000227415 750 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC19.93■□□□□ 0.78
Chd1P40201 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chd1P40201 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Gm12899-201ENSMUST00000120565 551 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd1P40201 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19.93■□□□□ 0.78
Chd1P40201 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC19.93■□□□□ 0.78
Chd1P40201 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Gm27530-201ENSMUST00000184096 98 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC19.93■□□□□ 0.78
Chd1P40201 CT485607.1-201ENSMUST00000216100 85 ntBASIC19.93■□□□□ 0.78
Chd1P40201 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chd1P40201 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Chd1P40201 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd1P40201 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC19.92■□□□□ 0.78
Chd1P40201 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Gm43273-201ENSMUST00000199649 2594 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Gm21998-201ENSMUST00000117552 1308 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Gm12196-201ENSMUST00000120954 262 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.92■□□□□ 0.78
Chd1P40201 Gm15881-201ENSMUST00000148792 942 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Chd1P40201 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Gm6771-201ENSMUST00000182716 1001 ntBASIC19.92■□□□□ 0.78
Chd1P40201 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC19.92■□□□□ 0.78
Chd1P40201 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC19.92■□□□□ 0.78
Chd1P40201 Gm9463-201ENSMUST00000206707 601 ntBASIC19.92■□□□□ 0.78
Chd1P40201 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Chd1P40201 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.92■□□□□ 0.78
Chd1P40201 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd1P40201 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC19.91■□□□□ 0.78
Chd1P40201 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Chd1P40201 Gm43962-201ENSMUST00000203898 190 ntBASIC19.91■□□□□ 0.78
Chd1P40201 AC107638.1-201ENSMUST00000213690 1061 ntBASIC19.91■□□□□ 0.78
Chd1P40201 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Chd1P40201 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd1P40201 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Chd1P40201 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC19.9■□□□□ 0.78
Chd1P40201 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd1P40201 Gm20392-201ENSMUST00000173047 701 ntBASIC19.9■□□□□ 0.78
Chd1P40201 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chd1P40201 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd1P40201 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms