Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh4P39038 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cdh4P39038 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh4P39038 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cdh4P39038 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh4P39038 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cdh4P39038 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh4P39038 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh4P39038 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh4P39038 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.02□□□□□ -0.33
Cdh4P39038 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Mir6392-201ENSMUST00000184924 108 ntBASIC13.02□□□□□ -0.33
Cdh4P39038 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
Cdh4P39038 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.02□□□□□ -0.33
Cdh4P39038 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdh4P39038 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh4P39038 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh4P39038 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh4P39038 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.02□□□□□ -0.33
Cdh4P39038 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdh4P39038 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh4P39038 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Gm11524-201ENSMUST00000119349 807 ntBASIC13.01□□□□□ -0.33
Cdh4P39038 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdh4P39038 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Gm19078-201ENSMUST00000206311 727 ntBASIC13.01□□□□□ -0.33
Cdh4P39038 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.01□□□□□ -0.33
Cdh4P39038 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.01□□□□□ -0.33
Cdh4P39038 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh4P39038 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh4P39038 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh4P39038 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13□□□□□ -0.33
Cdh4P39038 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Gm12341-201ENSMUST00000119724 503 ntBASIC13□□□□□ -0.33
Cdh4P39038 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13□□□□□ -0.33
Cdh4P39038 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Gm45668-201ENSMUST00000211271 493 ntBASIC13□□□□□ -0.33
Cdh4P39038 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh4P39038 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh4P39038 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms