Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.93□□□□□ -0.5
Upk2P38575 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk2P38575 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Gm9797-201ENSMUST00000052902 613 ntBASIC11.93□□□□□ -0.5
Upk2P38575 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.93□□□□□ -0.5
Upk2P38575 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk2P38575 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk2P38575 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.93□□□□□ -0.5
Upk2P38575 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk2P38575 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.93□□□□□ -0.5
Upk2P38575 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.92□□□□□ -0.5
Upk2P38575 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.92□□□□□ -0.5
Upk2P38575 Gm17330-201ENSMUST00000221047 165 ntBASIC11.92□□□□□ -0.5
Upk2P38575 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.92□□□□□ -0.5
Upk2P38575 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk2P38575 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk2P38575 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk2P38575 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk2P38575 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk2P38575 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk2P38575 Gm15321-201ENSMUST00000121290 288 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.91□□□□□ -0.5
Upk2P38575 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Upk2P38575 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.91□□□□□ -0.5
Upk2P38575 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Gm5279-201ENSMUST00000199575 745 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk2P38575 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.91□□□□□ -0.5
Upk2P38575 Gm18041-201ENSMUST00000218210 618 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk2P38575 Gm24447-201ENSMUST00000083977 338 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.91□□□□□ -0.5
Upk2P38575 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk2P38575 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Upk2P38575 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk2P38575 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms