Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Gm44719-201ENSMUST00000206404 149 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Gm17794-201ENSMUST00000220252 955 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Gm5356-201ENSMUST00000093326 615 ntBASIC13.18□□□□□ -0.3
Hoxc11P31313 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc11P31313 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxc11P31313 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Gm27892-201ENSMUST00000185017 106 ntBASIC13.17□□□□□ -0.3
Hoxc11P31313 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.17□□□□□ -0.3
Hoxc11P31313 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Gm6266-201ENSMUST00000203844 806 ntBASIC13.17□□□□□ -0.3
Hoxc11P31313 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc11P31313 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc11P31313 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Gm43094-201ENSMUST00000196549 921 ntBASIC13.16□□□□□ -0.3
Hoxc11P31313 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.16□□□□□ -0.3
Hoxc11P31313 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.16□□□□□ -0.3
Hoxc11P31313 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc11P31313 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc11P31313 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc11P31313 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms