Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl6P27784 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ccl6P27784 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl6P27784 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.6□□□□□ -0.71
Ccl6P27784 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm3436-201ENSMUST00000179930 840 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm8927-201ENSMUST00000181978 981 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm27680-201ENSMUST00000184192 160 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm27321-201ENSMUST00000185021 205 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ccl6P27784 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.6□□□□□ -0.71
Ccl6P27784 Gm3222-201ENSMUST00000071282 990 ntBASIC10.6□□□□□ -0.71
Ccl6P27784 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.6□□□□□ -0.71
Ccl6P27784 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccl6P27784 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.59□□□□□ -0.71
Ccl6P27784 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Ccl6P27784 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.59□□□□□ -0.71
Ccl6P27784 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.59□□□□□ -0.71
Ccl6P27784 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccl6P27784 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl6P27784 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms