Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Tnfrsf1aP25118 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf1aP25118 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf1aP25118 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfrsf1aP25118 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfrsf1aP25118 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf1aP25118 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm3436-201ENSMUST00000179930 840 ntBASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm17837-201ENSMUST00000186435 985 ntBASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm10576-201ENSMUST00000191927 825 ntBASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf1aP25118 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm12585-201ENSMUST00000117307 290 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm8927-201ENSMUST00000181978 981 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm6888-201ENSMUST00000221983 706 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Gm3222-201ENSMUST00000071282 990 ntBASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfrsf1aP25118 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms