Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm3P21107 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.21■□□□□ 0.03
Tpm3P21107 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Tpm3P21107 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tpm3P21107 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm3P21107 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Tpm3P21107 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.21■□□□□ 0.02
Tpm3P21107 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm3P21107 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm3P21107 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.2■□□□□ 0.02
Tpm3P21107 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Tpm3P21107 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Tpm3P21107 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.2■□□□□ 0.02
Tpm3P21107 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Gm9103-201ENSMUST00000119371 405 ntBASIC15.2■□□□□ 0.02
Tpm3P21107 Mir8098-201ENSMUST00000184011 137 ntBASIC15.2■□□□□ 0.02
Tpm3P21107 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.2■□□□□ 0.02
Tpm3P21107 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.2■□□□□ 0.02
Tpm3P21107 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Tpm3P21107 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tpm3P21107 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tpm3P21107 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.19■□□□□ 0.02
Tpm3P21107 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.19■□□□□ 0.02
Tpm3P21107 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Gm11452-201ENSMUST00000122376 690 ntBASIC15.19■□□□□ 0.02
Tpm3P21107 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tpm3P21107 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tpm3P21107 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.19■□□□□ 0.02
Tpm3P21107 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tpm3P21107 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.19■□□□□ 0.02
Tpm3P21107 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.19■□□□□ 0.02
Tpm3P21107 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tpm3P21107 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tpm3P21107 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Mir874-201ENSMUST00000104769 76 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.18■□□□□ 0.02
Tpm3P21107 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.18■□□□□ 0.02
Tpm3P21107 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Gm15590-201ENSMUST00000078419 552 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
Tpm3P21107 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms