Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.43□□□□□ -0.42
Hmgn1P18608 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Gm9719-201ENSMUST00000162765 543 ntBASIC12.42□□□□□ -0.42
Hmgn1P18608 Gm9824-201ENSMUST00000178707 561 ntBASIC12.42□□□□□ -0.42
Hmgn1P18608 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Gm6916-202ENSMUST00000205523 195 ntBASIC12.42□□□□□ -0.42
Hmgn1P18608 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgn1P18608 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.42□□□□□ -0.42
Hmgn1P18608 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.42□□□□□ -0.42
Hmgn1P18608 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hmgn1P18608 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn1P18608 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn1P18608 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgn1P18608 Gm11745-201ENSMUST00000121669 448 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.41□□□□□ -0.42
Hmgn1P18608 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.41□□□□□ -0.42
Hmgn1P18608 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn1P18608 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms