Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxb3P09026 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.54□□□□□ -0.24
Hoxb3P09026 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.54□□□□□ -0.24
Hoxb3P09026 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.54□□□□□ -0.24
Hoxb3P09026 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Hoxb3P09026 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxb3P09026 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxb3P09026 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm16177-201ENSMUST00000120728 718 ntBASIC13.53□□□□□ -0.24
Hoxb3P09026 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.53□□□□□ -0.24
Hoxb3P09026 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.53□□□□□ -0.24
Hoxb3P09026 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.53□□□□□ -0.24
Hoxb3P09026 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxb3P09026 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxb3P09026 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Hoxb3P09026 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.52□□□□□ -0.24
Hoxb3P09026 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hoxb3P09026 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxb3P09026 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm12928-201ENSMUST00000117115 573 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm11793-201ENSMUST00000120433 981 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm18595-201ENSMUST00000175736 1068 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm5051-201ENSMUST00000204085 485 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm19208-201ENSMUST00000213861 912 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxb3P09026 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.52□□□□□ -0.25
Hoxb3P09026 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hoxb3P09026 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxb3P09026 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxb3P09026 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms