Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc8P09025 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hoxc8P09025 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc8P09025 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc8P09025 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc8P09025 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.33□□□□□ -0.11
Hoxc8P09025 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc8P09025 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc8P09025 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.33□□□□□ -0.12
Hoxc8P09025 Gm11964-201ENSMUST00000120982 444 ntBASIC14.33□□□□□ -0.12
Hoxc8P09025 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc8P09025 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc8P09025 Morn2-202ENSMUST00000227729 656 ntBASIC14.33□□□□□ -0.12
Hoxc8P09025 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.33□□□□□ -0.12
Hoxc8P09025 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc8P09025 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc8P09025 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.32□□□□□ -0.12
Hoxc8P09025 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.32□□□□□ -0.12
Hoxc8P09025 Gm13316-201ENSMUST00000140537 691 ntBASIC14.32□□□□□ -0.12
Hoxc8P09025 Gm37489-201ENSMUST00000191883 159 ntBASIC14.32□□□□□ -0.12
Hoxc8P09025 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.32□□□□□ -0.12
Hoxc8P09025 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc8P09025 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc8P09025 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc8P09025 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hoxc8P09025 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxc8P09025 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc8P09025 Gm22121-201ENSMUST00000175148 54 ntBASIC14.31□□□□□ -0.12
Hoxc8P09025 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc8P09025 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms