Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.11□□□□□ -0.47
P06344 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06344 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06344 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
P06344 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
P06344 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.1□□□□□ -0.47
P06344 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.1□□□□□ -0.47
P06344 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.1□□□□□ -0.47
P06344 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.1□□□□□ -0.47
P06344 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.1□□□□□ -0.47
P06344 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
P06344 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.1□□□□□ -0.47
P06344 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.1□□□□□ -0.47
P06344 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06344 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.1□□□□□ -0.47
P06344 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.1□□□□□ -0.47
P06344 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06344 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.09□□□□□ -0.47
P06344 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.09□□□□□ -0.47
P06344 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06344 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.09□□□□□ -0.47
P06344 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06344 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.09□□□□□ -0.47
P06344 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.09□□□□□ -0.47
P06344 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P06344 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.09□□□□□ -0.47
P06344 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
P06344 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.09□□□□□ -0.47
P06344 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
P06344 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06344 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms