Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
PrnpP04925 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PrnpP04925 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.01□□□□□ -0.17
PrnpP04925 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.01□□□□□ -0.17
PrnpP04925 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PrnpP04925 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.01□□□□□ -0.17
PrnpP04925 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.01□□□□□ -0.17
PrnpP04925 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.01□□□□□ -0.17
PrnpP04925 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PrnpP04925 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.01□□□□□ -0.17
PrnpP04925 Gm43758-201ENSMUST00000199500 367 ntBASIC14.01□□□□□ -0.17
PrnpP04925 Cts7-204ENSMUST00000225321 1257 ntBASIC14.01□□□□□ -0.17
PrnpP04925 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.01□□□□□ -0.17
PrnpP04925 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.01□□□□□ -0.17
PrnpP04925 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PrnpP04925 Gm18244-201ENSMUST00000219747 1566 ntBASIC14□□□□□ -0.17
PrnpP04925 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Gm8805-201ENSMUST00000117848 313 ntBASIC14□□□□□ -0.17
PrnpP04925 Gm6447-201ENSMUST00000118905 835 ntBASIC14□□□□□ -0.17
PrnpP04925 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Gm38241-201ENSMUST00000192641 898 ntBASIC14□□□□□ -0.17
PrnpP04925 Gm38341-201ENSMUST00000195357 515 ntBASIC14□□□□□ -0.17
PrnpP04925 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
PrnpP04925 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14□□□□□ -0.17
PrnpP04925 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14□□□□□ -0.17
PrnpP04925 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14□□□□□ -0.17
PrnpP04925 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PrnpP04925 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.99□□□□□ -0.17
PrnpP04925 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PrnpP04925 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.99□□□□□ -0.17
PrnpP04925 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.99□□□□□ -0.17
PrnpP04925 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.99□□□□□ -0.17
PrnpP04925 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.99□□□□□ -0.17
PrnpP04925 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.99□□□□□ -0.17
PrnpP04925 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.99□□□□□ -0.17
PrnpP04925 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PrnpP04925 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PrnpP04925 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms