Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
P01852 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.45□□□□□ -0.42
P01852 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P01852 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
P01852 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
P01852 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
P01852 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.44□□□□□ -0.42
P01852 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.44□□□□□ -0.42
P01852 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
P01852 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
P01852 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.44□□□□□ -0.42
P01852 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
P01852 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.44□□□□□ -0.42
P01852 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
P01852 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.44□□□□□ -0.42
P01852 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.44□□□□□ -0.42
P01852 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.44□□□□□ -0.42
P01852 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Gm15823-201ENSMUST00000064305 670 ntBASIC12.44□□□□□ -0.42
P01852 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.44□□□□□ -0.42
P01852 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.44□□□□□ -0.42
P01852 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
P01852 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P01852 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.43□□□□□ -0.42
P01852 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P01852 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
P01852 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.43□□□□□ -0.42
P01852 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.43□□□□□ -0.42
P01852 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.43□□□□□ -0.42
P01852 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.43□□□□□ -0.42
P01852 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P01852 Gm44719-201ENSMUST00000206404 149 ntBASIC12.43□□□□□ -0.42
P01852 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.43□□□□□ -0.42
P01852 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.43□□□□□ -0.42
P01852 Gm18624-201ENSMUST00000220966 658 ntBASIC12.43□□□□□ -0.42
P01852 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
P01852 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P01852 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
P01852 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.42□□□□□ -0.42
P01852 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Grk6-205ENSMUST00000224653 2976 ntBASIC12.42□□□□□ -0.42
P01852 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P01852 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms