Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Matn4O89029 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Matn4O89029 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Matn4O89029 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Matn4O89029 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Matn4O89029 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Gm44335-201ENSMUST00000196879 141 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Gm44297-201ENSMUST00000198304 141 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Gm44346-201ENSMUST00000198851 141 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Matn4O89029 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Matn4O89029 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Matn4O89029 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.84□□□□□ -0.35
Matn4O89029 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.84□□□□□ -0.35
Matn4O89029 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Matn4O89029 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Matn4O89029 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Matn4O89029 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Matn4O89029 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Matn4O89029 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Matn4O89029 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Matn4O89029 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Matn4O89029 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.83□□□□□ -0.36
Matn4O89029 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Mir1897-201ENSMUST00000122581 272 ntBASIC12.83□□□□□ -0.36
Matn4O89029 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.83□□□□□ -0.36
Matn4O89029 Gm4804-201ENSMUST00000182234 999 ntBASIC12.83□□□□□ -0.36
Matn4O89029 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.83□□□□□ -0.36
Matn4O89029 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Matn4O89029 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Matn4O89029 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Matn4O89029 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Matn4O89029 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.82□□□□□ -0.36
Matn4O89029 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.82□□□□□ -0.36
Matn4O89029 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Matn4O89029 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Matn4O89029 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Matn4O89029 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Matn4O89029 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms