Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.54■□□□□ 0.24
Setdb1O88974 Gm13786-201ENSMUST00000122371 333 ntBASIC16.54■□□□□ 0.24
Setdb1O88974 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.54■□□□□ 0.24
Setdb1O88974 Gm29396-201ENSMUST00000185659 716 ntBASIC16.54■□□□□ 0.24
Setdb1O88974 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.54■□□□□ 0.24
Setdb1O88974 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.54■□□□□ 0.24
Setdb1O88974 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Setdb1O88974 Gm24447-201ENSMUST00000083977 338 ntBASIC16.54■□□□□ 0.24
Setdb1O88974 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.54■□□□□ 0.24
Setdb1O88974 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Setdb1O88974 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Setdb1O88974 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Setdb1O88974 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Setdb1O88974 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.53■□□□□ 0.24
Setdb1O88974 Gm15770-201ENSMUST00000117498 584 ntBASIC16.53■□□□□ 0.24
Setdb1O88974 Gm17376-201ENSMUST00000166016 84 ntBASIC16.53■□□□□ 0.24
Setdb1O88974 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.53■□□□□ 0.24
Setdb1O88974 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Setdb1O88974 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Setdb1O88974 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.53■□□□□ 0.24
Setdb1O88974 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.53■□□□□ 0.24
Setdb1O88974 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.53■□□□□ 0.24
Setdb1O88974 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Setdb1O88974 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.53■□□□□ 0.24
Setdb1O88974 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Setdb1O88974 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Setdb1O88974 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.52■□□□□ 0.24
Setdb1O88974 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.52■□□□□ 0.24
Setdb1O88974 Gm12241-201ENSMUST00000118330 726 ntBASIC16.52■□□□□ 0.24
Setdb1O88974 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.52■□□□□ 0.24
Setdb1O88974 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Gm27341-201ENSMUST00000183570 106 ntBASIC16.52■□□□□ 0.24
Setdb1O88974 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.52■□□□□ 0.24
Setdb1O88974 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Setdb1O88974 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Setdb1O88974 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.52■□□□□ 0.23
Setdb1O88974 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.52■□□□□ 0.23
Setdb1O88974 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Setdb1O88974 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Setdb1O88974 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Setdb1O88974 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.51■□□□□ 0.23
Setdb1O88974 Gm38158-201ENSMUST00000194617 339 ntBASIC16.51■□□□□ 0.23
Setdb1O88974 Gm43138-201ENSMUST00000199123 708 ntBASIC16.51■□□□□ 0.23
Setdb1O88974 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Setdb1O88974 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Gm8227-201ENSMUST00000223306 571 ntBASIC16.51■□□□□ 0.23
Setdb1O88974 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Setdb1O88974 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms