Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.11□□□□□ -0.47
CcnkO88874 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CcnkO88874 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Gm23935-201ENSMUST00000102303 57 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Gm24270-201ENSMUST00000102326 57 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.11□□□□□ -0.47
CcnkO88874 Gm11745-201ENSMUST00000121669 448 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.11□□□□□ -0.47
CcnkO88874 Gm24245-201ENSMUST00000157318 57 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Gm18889-201ENSMUST00000174284 929 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.11□□□□□ -0.47
CcnkO88874 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.11□□□□□ -0.47
CcnkO88874 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.11□□□□□ -0.47
CcnkO88874 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.11□□□□□ -0.47
CcnkO88874 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.11□□□□□ -0.47
CcnkO88874 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.1□□□□□ -0.47
CcnkO88874 Gm13365-201ENSMUST00000121188 973 ntBASIC12.1□□□□□ -0.47
CcnkO88874 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.1□□□□□ -0.47
CcnkO88874 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CcnkO88874 Gm2756-201ENSMUST00000195851 400 ntBASIC12.1□□□□□ -0.47
CcnkO88874 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.1□□□□□ -0.47
CcnkO88874 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.1□□□□□ -0.47
CcnkO88874 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.1□□□□□ -0.47
CcnkO88874 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.1□□□□□ -0.47
CcnkO88874 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CcnkO88874 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.1□□□□□ -0.47
CcnkO88874 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CcnkO88874 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.1□□□□□ -0.47
CcnkO88874 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcnkO88874 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms