Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Dnmt3aO88508 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.7□□□□□ -0.22
Dnmt3aO88508 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.7□□□□□ -0.22
Dnmt3aO88508 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.7□□□□□ -0.22
Dnmt3aO88508 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dnmt3aO88508 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.69□□□□□ -0.22
Dnmt3aO88508 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.69□□□□□ -0.22
Dnmt3aO88508 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.69□□□□□ -0.22
Dnmt3aO88508 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dnmt3aO88508 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Dnmt3aO88508 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms