Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vti1bO88384 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.98□□□□□ -0.33
Vti1bO88384 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vti1bO88384 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.98□□□□□ -0.33
Vti1bO88384 Gm15957-201ENSMUST00000118893 974 ntBASIC12.98□□□□□ -0.33
Vti1bO88384 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Gm16476-201ENSMUST00000221544 139 ntBASIC12.98□□□□□ -0.33
Vti1bO88384 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.98□□□□□ -0.33
Vti1bO88384 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vti1bO88384 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vti1bO88384 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vti1bO88384 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Vti1bO88384 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm27618-201ENSMUST00000183671 60 ntBASIC12.97□□□□□ -0.33
Vti1bO88384 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.97□□□□□ -0.33
Vti1bO88384 Dupd1-202ENSMUST00000224735 548 ntBASIC12.97□□□□□ -0.33
Vti1bO88384 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vti1bO88384 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Mir125a-201ENSMUST00000083545 68 ntBASIC12.97□□□□□ -0.33
Vti1bO88384 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.97□□□□□ -0.33
Vti1bO88384 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.97□□□□□ -0.33
Vti1bO88384 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vti1bO88384 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.97□□□□□ -0.33
Vti1bO88384 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vti1bO88384 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vti1bO88384 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.96□□□□□ -0.33
Vti1bO88384 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Gm27533-201ENSMUST00000183800 152 ntBASIC12.96□□□□□ -0.33
Vti1bO88384 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.96□□□□□ -0.33
Vti1bO88384 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Shd-206ENSMUST00000225145 998 ntBASIC12.96□□□□□ -0.33
Vti1bO88384 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1bO88384 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1bO88384 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms