Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.08□□□□□ -0.48
Col5a1O88207 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.08□□□□□ -0.48
Col5a1O88207 Gm37042-201ENSMUST00000193816 581 ntBASIC12.08□□□□□ -0.48
Col5a1O88207 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col5a1O88207 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.08□□□□□ -0.48
Col5a1O88207 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col5a1O88207 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col5a1O88207 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Col5a1O88207 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Col5a1O88207 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.08□□□□□ -0.48
Col5a1O88207 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col5a1O88207 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.07□□□□□ -0.48
Col5a1O88207 Gm7467-201ENSMUST00000185173 652 ntBASIC12.07□□□□□ -0.48
Col5a1O88207 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm44069-201ENSMUST00000204898 506 ntBASIC12.07□□□□□ -0.48
Col5a1O88207 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.07□□□□□ -0.48
Col5a1O88207 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Col5a1O88207 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Col5a1O88207 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.07□□□□□ -0.48
Col5a1O88207 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm26185-201ENSMUST00000157692 266 ntBASIC12.07□□□□□ -0.48
Col5a1O88207 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col5a1O88207 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.07□□□□□ -0.48
Col5a1O88207 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.07□□□□□ -0.48
Col5a1O88207 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col5a1O88207 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col5a1O88207 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col5a1O88207 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col5a1O88207 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.06□□□□□ -0.48
Col5a1O88207 Snord83b-201ENSMUST00000104546 94 ntBASIC12.06□□□□□ -0.48
Col5a1O88207 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.06□□□□□ -0.48
Col5a1O88207 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Col5a1O88207 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col5a1O88207 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col5a1O88207 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col5a1O88207 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.06□□□□□ -0.48
Col5a1O88207 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms