Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.38□□□□□ -0.11
Itgb3O54890 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Itgb3O54890 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Gm38144-201ENSMUST00000192790 465 ntBASIC14.38□□□□□ -0.11
Itgb3O54890 Gm7287-201ENSMUST00000205267 602 ntBASIC14.38□□□□□ -0.11
Itgb3O54890 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.38□□□□□ -0.11
Itgb3O54890 Gm17794-201ENSMUST00000220252 955 ntBASIC14.38□□□□□ -0.11
Itgb3O54890 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.38□□□□□ -0.11
Itgb3O54890 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Itgb3O54890 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Itgb3O54890 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Itgb3O54890 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Itgb3O54890 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Itgb3O54890 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Itgb3O54890 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Itgb3O54890 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.37□□□□□ -0.11
Itgb3O54890 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Itgb3O54890 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.37□□□□□ -0.11
Itgb3O54890 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.37□□□□□ -0.11
Itgb3O54890 Gm27839-201ENSMUST00000184242 106 ntBASIC14.37□□□□□ -0.11
Itgb3O54890 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.37□□□□□ -0.11
Itgb3O54890 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.37□□□□□ -0.11
Itgb3O54890 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Itgb3O54890 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Itgb3O54890 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.36□□□□□ -0.11
Itgb3O54890 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Itgb3O54890 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.36□□□□□ -0.11
Itgb3O54890 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.36□□□□□ -0.11
Itgb3O54890 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.36□□□□□ -0.11
Itgb3O54890 Gm38671-201ENSMUST00000200573 130 ntBASIC14.36□□□□□ -0.11
Itgb3O54890 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.36□□□□□ -0.11
Itgb3O54890 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
Itgb3O54890 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.36□□□□□ -0.11
Itgb3O54890 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Itgb3O54890 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Itgb3O54890 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.35□□□□□ -0.11
Itgb3O54890 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Itgb3O54890 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Itgb3O54890 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.35□□□□□ -0.11
Itgb3O54890 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Itgb3O54890 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms