Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Prrt1O35449 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Gm13597-201ENSMUST00000121239 375 ntBASIC11.48□□□□□ -0.57
Prrt1O35449 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.48□□□□□ -0.57
Prrt1O35449 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.48□□□□□ -0.57
Prrt1O35449 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.48□□□□□ -0.57
Prrt1O35449 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.48□□□□□ -0.57
Prrt1O35449 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.48□□□□□ -0.57
Prrt1O35449 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.48□□□□□ -0.57
Prrt1O35449 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.48□□□□□ -0.57
Prrt1O35449 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Prrt1O35449 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Prrt1O35449 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Prrt1O35449 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Prrt1O35449 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Prrt1O35449 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prrt1O35449 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prrt1O35449 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.47□□□□□ -0.57
Prrt1O35449 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Prrt1O35449 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.47□□□□□ -0.57
Prrt1O35449 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.47□□□□□ -0.57
Prrt1O35449 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Prrt1O35449 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Prrt1O35449 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Prrt1O35449 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Prrt1O35449 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.46□□□□□ -0.57
Prrt1O35449 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Gm5177-201ENSMUST00000183092 997 ntBASIC11.46□□□□□ -0.57
Prrt1O35449 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Prrt1O35449 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.46□□□□□ -0.57
Prrt1O35449 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Prrt1O35449 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Prrt1O35449 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Prrt1O35449 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.45□□□□□ -0.58
Prrt1O35449 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Prrt1O35449 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Prrt1O35449 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Prrt1O35449 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Prrt1O35449 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Prrt1O35449 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Prrt1O35449 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.45□□□□□ -0.58
Prrt1O35449 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms