Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh1F7BJK1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm12428-201ENSMUST00000119844 727 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm11594-201ENSMUST00000122313 162 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh1F7BJK1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm25911-201ENSMUST00000157621 56 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm29541-201ENSMUST00000191351 678 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh1F7BJK1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms