Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc188F6WEU2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm6447-201ENSMUST00000118905 835 ntBASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm17391-201ENSMUST00000171036 126 ntBASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm8492-201ENSMUST00000182375 987 ntBASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc188F6WEU2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc188F6WEU2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc188F6WEU2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc188F6WEU2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Gm17208-201ENSMUST00000168388 535 ntBASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc188F6WEU2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc188F6WEU2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms