Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.24■□□□□ 0.19
Ube4aE9Q735 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm27501-201ENSMUST00000183599 107 ntBASIC16.24■□□□□ 0.19
Ube4aE9Q735 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.24■□□□□ 0.19
Ube4aE9Q735 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ube4aE9Q735 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.23■□□□□ 0.19
Ube4aE9Q735 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gm42627-201ENSMUST00000197347 224 ntBASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.23■□□□□ 0.19
Ube4aE9Q735 Gm45930-201ENSMUST00000221330 292 ntBASIC16.23■□□□□ 0.19
Ube4aE9Q735 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.23■□□□□ 0.19
Ube4aE9Q735 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4aE9Q735 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm11637-201ENSMUST00000120601 592 ntBASIC16.22■□□□□ 0.19
Ube4aE9Q735 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Mir8109-201ENSMUST00000184375 117 ntBASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm43133-201ENSMUST00000197472 463 ntBASIC16.22■□□□□ 0.19
Ube4aE9Q735 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.22■□□□□ 0.19
Ube4aE9Q735 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms