Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm15957-201ENSMUST00000118893 974 ntBASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccnb1ip1D3Z3K2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms