Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12-1A0N8R1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm27525-201ENSMUST00000184465 107 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm28630-201ENSMUST00000187806 498 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm5425-201ENSMUST00000214125 459 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm9229-201ENSMUST00000222777 126 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.35□□□□□ -0.59
Trav12-1A0N8R1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm4995-201ENSMUST00000117247 432 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Mir1897-201ENSMUST00000122581 272 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm24420-201ENSMUST00000176676 59 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm10253-201ENSMUST00000194270 940 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12-1A0N8R1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
Trav12-1A0N8R1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12-1A0N8R1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms