Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Gm21470-201ENSMUST00000187680 696 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 Chchd1-203ENSMUST00000224633 557 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 Shd-206ENSMUST00000225145 998 ntBASIC11.15□□□□□ -0.62
Trav18A0A075B656 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.15□□□□□ -0.63
Trav18A0A075B656 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav18A0A075B656 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Mir449b-201ENSMUST00000104833 80 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm46209-201ENSMUST00000217912 553 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.14□□□□□ -0.63
Trav18A0A075B656 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav18A0A075B656 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms