Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm20445-201ENSMUST00000061905 565 ntBASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb2S4R1M3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Mir7023-201ENSMUST00000185093 64 ntBASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Gm29667-201ENSMUST00000190817 490 ntBASIC13.61□□□□□ -0.23
H2afb2S4R1M3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb2S4R1M3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm21854-201ENSMUST00000179901 471 ntBASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb2S4R1M3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb2S4R1M3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.59□□□□□ -0.23
H2afb2S4R1M3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms